Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934363.1_cds_XP_016480448.1_71889
CDS Infomation

[gene=LOC107801611] [db_xref=GeneID:107801611] [protein=U4/U6 small nuclear ribonucleoprotein PRP4-like protein isoform X2] [protein_id=XP_016480448.1] [location=complement(join(98904..98998,100123..100204,100296..100493,100600..100872,100987..101167,101640..102541))] [gbkey=CDS]
Sequence

ATGGACGCTGAGGATGAAATTCCTGCTTCAACGGAAGAACCTTCGACTCTAGTTGGTGAT
AATTCGACTATGGTTAATGCTATAGGAGCGATAAATCTTCAACCAGTTCCACCTGTCACT
CCACCGGTTGCTCCAACAGTTATCCTTCCTCCAGTTGTGCCTGCAATTGCTCCACGGCCT
GCAGTCCCTACCCCTATTCCTCCCCCATTAGCTCCGTTGCCTGGTCGTCCACCTATCCTT
AGGCCTCCAGTAGCTCAGAATGGAGAAGTGCGAGCGAGCGATTCAGATTCTGATGAAGAA
ATGGGATCTGATCGTGGTACTGGGGGCTCAGCTCAAGAATATGAGATATCCGAGGAGAGC
AGACTTGTCAGAGAGAGGCAGGAGAAAGCCGTGCAGGAGCTTCTGATGAAGCGACGTGCA
GCTGCGCTAGCTGTTCCTACAAATGATATGGCTGTTCGGGCTCGCCTTCGAAGGCTTGGT
GAGCCTATAACTCTCTTTGGAGAAAGGGAGATGGAAAGAAGGGACCGTCTGCGGATGCTT
ATGGCAAGGCTTGATGCAGAAGGGCAGCTGGAAAAGCTGATGAAAGCGCACGAGGATGAA
GAAGCTGCAGCTTCTGCTGCACCAGCAGAGGAGGAGGATATTCAGTACCCCTTCTACACT
GAAGGATCAAAAACACTTTTAGATGCAAGGGTAGAAATTGCAAAATATTCTTTAGTTAAG
TCAGCCTTACGTCTCCACCGCGCAAGGAGGAAAAGGGACGATCCAGATGAAGATGTGGAT
GCAGAGGTTGATTGGGCTTTGAAGCAAGCAGGGAGCCTCGCCCTTGATTGCAGTGAAATT
GGAGACGATCGACCCCTTTGGGGATGCTCGCTTTCACATGATGGAAAGATGCTTGCTACC
TGTTCTCTGAGTGGAATTGCAAAGTTATGGAGTATGCCTCAAGTGCAAAAGCTTTCCACC
CTAAAGGGTCACACCGAACGAGCTACTGATGTTGTGTTCTCTCCGACAAGCAATTATTTA
GCTACTGCATCTGCTGATAGGACTGCAAAGTTATGGAACTCAGAAGGGTCTCTTCTCAGG
ACGTTTGAGGGACATTTGGACCGTGTAGCTCGGATTGCCTTCCATCCTTGTGGGAAGTAC
TTGGGCACAGCTAGCTTTGACAAAACTTGGAGATTATGGGATGTAGAAAGTGGTGAAGAG
TTGCTTTTGCAAGAAGGTCACAGTAGGAGTGTGTATGGATTGTCGTTTCACCATGATGGT
TCATTGGTGGCATCATGTGGGCTGGATGCACTTGTTCGAGTGTGGGATTTAAGGACTGGA
CGAAGTATTCTTGCTCTGGAAGGTCATGTTAAACCGGTTCTCGGTGTCAGCTTTTCTCCC
AATGGTTATCATTTGGCAAGTGGTGGTGAAGATAATACCTGCCGTATTTGGGACTTAAGG
CAGAGAAAATCTTTGTACATCATACCTGCTCACTCCAATCTTATTTCTCAAGTTAAATTT
GAACCTCAGGAGGGATACTTTTTGGTTACAGCGTCCTACGATACGACGGCTAAGGTATGG
TCATCAAGGGATTTCAAACCGGTGAAGACACTATCTGGTCATGAAGCAAAAGTCACGTCA
TTGGATGTAGCGGGAGATGGGCAACATATTGTCACTGTATCTCATGATCGAACAATCAAG
CTATGGTCAGGCAAAAACATTGAGAAGGAAGAGAAAATGGATACCGACTAG

Peptide Sequence

PEP ID

XP_016480448.1
PEP Infomation

PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein isoform X2 [Nicotiana tabacum]
Sequence

MDAEDEIPASTEEPSTLVGDNSTMVNAIGAINLQPVPPVTPPVAPTVILPPVVPAIAPRP
AVPTPIPPPLAPLPGRPPILRPPVAQNGEVRASDSDSDEEMGSDRGTGGSAQEYEISEES
RLVRERQEKAVQELLMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRML
MARLDAEGQLEKLMKAHEDEEAAASAAPAEEEDIQYPFYTEGSKTLLDARVEIAKYSLVK
SALRLHRARRKRDDPDEDVDAEVDWALKQAGSLALDCSEIGDDRPLWGCSLSHDGKMLAT
CSLSGIAKLWSMPQVQKLSTLKGHTERATDVVFSPTSNYLATASADRTAKLWNSEGSLLR
TFEGHLDRVARIAFHPCGKYLGTASFDKTWRLWDVESGEELLLQEGHSRSVYGLSFHHDG
SLVASCGLDALVRVWDLRTGRSILALEGHVKPVLGVSFSPNGYHLASGGEDNTCRIWDLR
QRKSLYIIPAHSNLISQVKFEPQEGYFLVTASYDTTAKVWSSRDFKPVKTLSGHEAKVTS
LDVAGDGQHIVTVSHDRTIKLWSGKNIEKEEKMDTD

Transcript Sequence

Gene sequence data has not been registered.